BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C09SP1|AL426498
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1271 1569 0.0
>3x_Contig1271
Length = 7459
Score = 1569 bits (791), Expect = 0.0
Identities = 792/793 (99%)
Strand = Plus / Minus
Query: 1 gatcttacgaatattcactgatgactattgaaaaatgggtttcgtcatttccagtttagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 gatcttacgaatattcactgatgactattgaaaaatgggtttcgtcatttccagtttagg 1086
Query: 61 agcaatggacaccggtaacagaaatcggtcctgaattcaattaaacggagatgtttaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 agcaatggacaccggtaacagaaatcggtcctgaattcaattaaacggagatgtttaata 1026
Query: 121 tcggaggaaactttcagttgggaggacgaatgcatcaatccactaattgcttttttctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tcggaggaaactttcagttgggaggacgaatgcatcaatccactaattgcttttttctca 966
Query: 181 cttcggagggtccaaaactttcaactctgcagccaaggaaaacctagtttcatcgctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 cttcggagggtccaaaactttcaactctgcagccaaggaaaacctagtttcatcgctggg 906
Query: 241 aaacgttgaatagcgtacggctgaataaatgagagtdaaacgggtggattgtgtcaaacc 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 905 aaacgttgaatagcgtacggctgaataaatgagagtaaaacgggtggattgtgtcaaacc 846
Query: 301 gcaaaaacaaaaattaatcggagtagcatcggagtaatgaactaaatcaactggctctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gcaaaaacaaaaattaatcggagtagcatcggagtaatgaactaaatcaactggctctta 786
Query: 361 aggtgttttgtatcagtcctgcacccacctgctctccattcccgggaacattcacgtgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aggtgttttgtatcagtcctgcacccacctgctctccattcccgggaacattcacgtgac 726
Query: 421 attatattgttctttagcccgggatcagcgatcgcacccaggacctaccctccccactct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 attatattgttctttagcccgggatcagcgatcgcacccaggacctaccctccccactct 666
Query: 481 tcttccagtcaaactcaaaaaaaagcattctaaccgttgcaaacttagactatttctgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tcttccagtcaaactcaaaaaaaagcattctaaccgttgcaaacttagactatttctgca 606
Query: 541 gaaactcatgtaccccacttcagccattactggtgttttagcctttcagtaaccgaagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gaaactcatgtaccccacttcagccattactggtgttttagcctttcagtaaccgaagca 546
Query: 601 ggctgtaactgtttctgagcgacagaaaataccatagaggctccagacctcttacttctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggctgtaactgtttctgagcgacagaaaataccatagaggctccagacctcttacttctg 486
Query: 661 atacgcacgattctagccgaaaaactaaaagaaaaccaacagaaagcagaaacctttgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atacgcacgattctagccgaaaaactaaaagaaaaccaacagaaagcagaaacctttgtt 426
Query: 721 tttctgagtgttgggagaacatcgtacaaaacgacaattgcccctcacttgctcccctga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tttctgagtgttgggagaacatcgtacaaaacgacaattgcccctcacttgctcccctga 366
Query: 781 tatcctttgaccc 793
|||||||||||||
Sbjct: 365 tatcctttgaccc 353
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5284
Number of Sequences: 1807
Number of extensions: 5284
Number of successful extensions: 23
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)